Vincent Andrearczyk - HES SO Valais Publications - Aigaion 2.0

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First name(s):	Vincent
Last name(s):	Andrearczyk

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Valentin Oreiller, Vincent Andrearczyk, Julien Fageot, John O. Prior and Adrien Depeursinge, 3D Solid Spherical Bispectrum CNNs for Biomedical Texture Analysis, 2020

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Arthur Chevalley, Valentin Oreiller, Julien Fageot, John O. Prior, Vincent Andrearczyk and Adrien Depeursinge, A Bispectral 3D UNet for Rotation Robustness in Medical Segmentation, in: The First Workshop on Topology- and Graph-Informed Imaging Informatics at MICCAI, 2024

Mara Graziani, Lidia Dutkiewicz, Davide Calvaresi, Jose Pereira Amorim, Katerina Yordanova, Mor Vered, Rahul Nair, Pedro H. Abreu, Tobias Blanke, Valeria Pulignano, John O. Prior, Lode Lauwaert, Wessel Reijers, Adrien Depeursinge, Vincent Andrearczyk and Henning Müller, A Global Taxonomy of Interpretable AI: Unifying the Terminology for the Technical and Social Sciences (2022), in: Artificial Intelligence Review, 56(3473–3504)

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Sebastian Otalora, Oscar Jimenez del Toro, Manfredo Atzori, Amjad Khan, Vincent Andrearczyk and Henning Müller, A systematic comparison of deep learning strategies for weakly supervised Gleason grading,, in: SPIE Medical Imaging, Houstonm, TX, USA, 2020

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Katharina Hoebel, Vincent Andrearczyk, Andrew Beers, Jay Patel, Ken Chang, Adrien Depeursinge, Henning Müller and Jayashree Kalpathy-Cramer, An Exploration of Uncertainty Information for Segmentation Quality Assessment, in: SPIE Medical Imaging 2020: Image Processing, Houston, TX, USA, pages 381-390, SPIE, 2020

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Ricky R. Savjani, Michael Lauria, Supratik Bose, Jie Deng, Ye Yuan and Vincent Andrearczyk, Automated Tumor Segmentation in Radiotherapy (2022), in: Seminars in Radiation Oncology, 32:4(319-329)

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Vincent Andrearczyk, Luis Schiappacasse, Daniel Abler, Marek Wodzinski, Andreas Hottinger, Matthieu Raccaud, Jean Bourhis, John O. Prior, Vincent Dunet and Adrien Depeursinge, Automatic Detection and Multi-Component Segmentation of Brain Metastases in Longitudinal MRI (2024), in: Nature Scientic Reports

Vincent Andrearczyk, Valentin Oreiller, Sarah Boughdad, Catherine Cheze-Le-Rest, Olena Tankyevych, Hesham Elhalawani, Mario Jreige, John O. Prior, Martin Vallières, Dimitris Visvikis, Mathieu Hatt and Adrien Depeursinge, Automatic Head and Neck Tumor Segmentation and Outcome Prediction Relying on FDG-PET/CT Images: Findings from the Second Edition of the HECKTOR Challenge (2023), in: Medical Image Analysis, 90:1(102972)

[]: IF 2022: 10.9

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Vincent Andrearczyk, Valentin Oreiller, Martin Vallières, Joel Castelli, Hesham Elhalawani, Mario Jreige, Sarah Boughdad, John O. Prior and Adrien Depeursinge, Automatic Segmentation of Head and Neck Tumors and Nodal Metastases in PET-CT scans, in: Medical Imaging with Deep Learning, Montréal, Canada, 2020

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Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Patrick Godau, Veronika Cheplygina, Michal Kozubek, Sharib Ali, Anubha Gupta, Jan Kybic, Alison Noble, Carlos Ortiz de Solórzano, Samiksha Pachade, Caroline Petitjean, Daniel Sage, Donglai Wei, Elizabeth Wilden, Deepak Alapatt, Vincent Andrearczyk, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Vivek Singh Bawa, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Jinwook Choi, Olivier Commowick, Marie Daum, Adrien Depeursinge, Reuben Dorent, Jan Egger, Hannah Eichhorn, Sandy Engelhardt, Melanie Ganz, Gabriel Girard, Lasse Hansen, Mattias Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Hyunjeong Kim, Bennett A Landman, Hongwei Bran Li, Jianning Li, Jun Ma, Anne Martel, Carlos Martín-Isla, Bjoern Menze, Chinedu Innocent Nwoye, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Carole H Sudre, Kimberlin van Wijnen, Armine Vardazaryan, Tom Vercauteren, Martin Wagner, Chuanbo Wang, Moi Hoon Yap, Zeyun Yu, Chun Yuan, Maximilian Zenk, Aneeq Zia, David Zimmerer, Rina Bao, Chanyeol Choi, Andrew Cohen, Oleh Dzyubachyk, Adrian Galdran, Tianyuan Gan, Tianqi Guo, Pradyumna Gupta, Mahmood Haithami, Edward Ho, Ikbeom Jang, Zhili Li, Zhengbo Luo, Filip Lux, Sokratis Makrogiannis, Dominik Müller, Young-tack Oh, Subeen Pang, Constantin Pape, Gorkem Polat, Charlotte Rosalie Reed, Kanghyun Ryu, Tim Scherr, Vajira Thambawita, Haoyu Wang, Xinliang Wang, Kele Xu, Hung Yeh, Doyeob Yeo, Yixuan Yuan, Yan Zeng, Xin Zhao, Julian Abbing, Jannes Adam, Nagesh Adluru, Niklas Agethen, Salman Ahmed, Yasmina Al Khalil, Mireia Alenyà, Esa Alhoniemi, Chengyang An, Talha Anwar, Tewodros Weldebirhan Arega, Netanell Avisdris, Dogu Baran Aydogan, Yingbin Bai, Maria Baldeon Calisto, Berke Doga Basaran, Marcel Beetz, Cheng Bian, Hao Bian, Kevin Blansit, Louise Bloch, Robert Bohnsack, Sara Bosticardo, Jack Breen, Mikael Brudfors, Raphael Brüngel, Mariano Cabezas, Alberto Cacciola, Zhiwei Chen, Yucong Chen, Daniel Tianming Chen, Minjeong Cho, Min-Kook Choi, Chuantao Xie Chuantao Xie, Dana Cobzas, Julien Cohen-Adad, Jorge Corral Acero, Sujit Kumar Das, Marcela de Oliveira, Hanqiu Deng, Guiming Dong, Lars Doorenbos, Cory Efird, Di Fan, Mehdi Fatan Serj, Alexandre Fenneteau, Lucas Fidon, Patryk Filipiak, René Finzel, Nuno R. Freitas, Christoph M. Friedrich, Mitchell Fulton, Finn Gaida, Francesco Galati, Christoforos Galazis, Chang Hee Gan, Zheyao Gao, Shengbo Gao, Matej Gazda, Beerend Gerats, Neil Getty, Adam Gibicar, Ryan Gifford, Sajan Gohil, Maria Grammatikopoulou, Daniel Grzech, Orhun Güley, Timo Günnemann, Chunxu Guo, Sylvain Guy, Heonjin Ha, Luyi Han, Il Song Han, Ali Hatamizadeh, Tian He, Jimin Heo, Sebastian Hitziger, SeulGi Hong, SeungBum Hong, Rian Huang, Ziyan Huang, Markus Huellebrand, Stephan Huschauer, Mustaffa Hussain, Tomoo Inubushi, Ece Isik Polat, Mojtaba Jafaritadi, SeongHun Jeong, Bailiang Jian, Yuanhong Jiang, Zhifan Jiang, Yueming Jin, Smriti Joshi, Abdolrahim Kadkhodamohammadi, Reda Abdellah Kamraoui, Inha Kang, Junghwa Kang, Davood Karimi, April Khademi, Muhammad Irfan Khan, Suleiman A. Khan, Rishab Khantwal, Kwang-Ju Kim, Timothy Kline, Satoshi Kondo, Elina Kontio, Adrian Krenzer, Artem Kroviakov, Hugo Kuijf, Satyadwyoom Kumar, Francesco La Rosa, Abhi Lad, Doohee Lee, Minho Lee, Chiara Lena, Hao Li, Ling Li, Xingyu Li, Fuyuan Liao, KuanLun Liao, Arlindo Limede Oliveira, Chaonan Lin, Shan Lin, Akis Linardos, Marius George Linguraru, Han Liu, Tao Liu, Di Liu, Yanling Liu, João Lourenço-Silva, Jingpei Lu, Jiangshan Lu, Imanol Luengo, Christina B. Lund, Huan Minh Luu and Yi Lv, Biomedical image analysis competitions: The state of current participation practice (2022), in: arXiv

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Mara Graziani, Ivan Eggel, Francois Deligand, Martin Bobák, Vincent Andrearczyk and Henning Müller, Breast Histopathology with High-Performance Computing and Deep Learning (2020), in: Computer and Informatics

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Pierre Fontaine, Vincent Andrearczyk, Valentin Oreiller, Daniel Abler, Joel Castelli, Oscar Acosta, R. De Crevoisier, Martin Vallières, Mario Jreige, John O. Prior and Adrien Depeursinge, Cleaning Radiotherapy Contours for Radiomics Studies, is it Worth it? A Head and Neck Cancer Study (2022), in: Clinical and Translational Radiation Oncology, 33(153-158)

[]: IF 2021 = 4.739

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Sacha Bors, Daniel Abler, Matthieu Dietz, Vincent Andrearczyk, Julien Fageot, Marie Nicod-Lalonde, Niklaus Schaefer, Robert DeKemp, Christel H. Kamani, John O. Prior and Adrien Depeursinge, Comparing various AI approaches to traditional quantitative assessment of the myocardial perfusion in [82Rb] PET for MACE prediction (2024), in: Nature Scientific Reports, 14:9644

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Daniel Abler, Vincent Andrearczyk, Valentin Oreiller, Javier Barranco Garcia, Diem Vuong, Stephanie Tanadini-Lang, Matthias Guckenberger, Mauricio Reyes and Adrien Depeursinge, Comparison of MR preprocessing strategies and sequences for radiomics-based MGMT prediction, in: Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries (MICCAI/BrainLes 2021), Cham, pages 367–380, Springer International Publishing, 2022

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Mara Graziani, Henning Müller and Vincent Andrearczyk, Concept attribution: Explaining CNN decisions to physicians (2020), in: Computers in Biology and Medicine

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Mara Graziani, An-Phi Nguyen, Laura O' Mahony, Henning Müller and Vincent Andrearczyk, Concept discovery and Dataset exploration with Singular Value Decomposition, ICLR Workshop on Trustworthy ML, 2023

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Vincent Andrearczyk, Mara Graziani, Henning Müller and Adrien Depeursinge, Consistency of Scale Covariance in Internal Representations of CNNs, in: Irish Machine Vision and Image Processing Conference, 2020

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Mara Graziani, Vincent Andrearczyk and Henning Müller, Deep Learning Interpretability: Measureing the relevance of clinical concepts in CNN features, in: State of the art in neural networks, Elsevier, 2022

Mara Graziani, Vincent Andrearczyk and Henning Müller, Deep learning interpretability: measuring the relevance of clinical concepts in convolutional neural networks features, Elsevier, volume 157-192, 2023

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Vincent Andrearczyk and Henning Müller, Deep Multimodal Classification of Image Types in Biomedical Journal Figures, in: CLEF 2018, Avignon, France, Springer, 2018

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Laura O' Mahony, Vincent Andrearczyk, Henning Müller and Mara Graziani, Disentangling Neuron Representations with Concept Vectors, in: Proceedings of the 2nd Explainable AI for Computer Vision (XAI4CV) Workshop at CVPR 2023, 2023

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Mara Graziani, Thomas Lompech, Henning Müller and Vincent Andrearczyk, Evaluation and Comparison of CNN Visual Explanations for Histopathology, in: XAI-AAAI-21, 2021

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Federico Spagnolo, Pedro M. Gordaliza, Po-Jui Lu, Mario Ocampo-Pineda, Xinjie Chen, Matthias Weigel, Maxence Wynen, Martina Absinta, Pietro Maggi, Meritxell Bach Cuadra, Vincent Andrearczyk, Adrien Depeursinge and Cristina Granziera, Explainability in automatic Paramagnetic Rim Lesion classification, in: 40th Congress Of The European Committee For Treatment And Research In Multiple Sclerosis (ECTRIMS), 2024

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Victor H. Contreras, Andrea Bagante, Niccolò Marini, Michael Schumacher, Vincent Andrearczyk and Davide Calvaresi, Explanation Generation via Decompositional Rules Extraction for Head and Neck Cancer Classification, in: Explainable and Transparent AI and Multi-Agent Systems, 2023

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Anjani Dhrangadhariya, Oscar Jimenez del Toro, Vincent Andrearczyk, Manfredo Atzori and Henning Müller, Exploiting the PubMed Central repository to mine out a large multimodal dataset of rare cancer studies, in: SPIE Medical Imaging, Houston, TX, USA, 2020

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Federico Spagnolo, Nataliia Molchanova, Mario Ocampo-Pineda, Lester Melie-Garcia, Meritxell Bach Cuadra, Cristina Granziera, Vincent Andrearczyk and Adrien Depeursinge, Exploiting XAI maps to improve MS lesion segmentation and detection in MRI, in: Workshop on Interpretability of Machine Intelligence in Medical Image Computing at MICCAI, 2024

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Vincent Andrearczyk, Julien Fageot, Valentin Oreiller, Xavier Montet and Adrien Depeursinge, Exploring local rotation invariance in 3D CNNs with steerable filters, in: Medical Imaging with Deep Learning, pages 15-26, Proceedings of Machine Learning Research, 2019

[]: Won the overall best paper award of MIDL 2019 !

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Michael T. McCann, Vincent Andrearczyk, Michael Unser and Adrien Depeursinge, Fast Rotational Sparse Coding (2018)(arXiv:1806.04374)

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Federico Spagnolo, Roger Schaer, Vincent Andrearczyk, Nataliia Molchanova, Mara Graziani, Henning Müller, Meritxell Bach Cuadra, Cristina Granziera and Adrien Depeursinge, FLAIR vs MPRAGE contribution to white matter lesion automatic segmentation in MS using localized saliency maps, in: Bern Interpretable AI Symposium (BIAS), 2023

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Pierre Fontaine, Vincent Andrearczyk, Valentin Oreiller, Joel Castelli, Mario Jreige, John O. Prior and Adrien Depeursinge, Fully Automatic Head and Neck Cancer Prognosis Prediction in PET/CT, in: Multimodal Learning for Clinical Decision Support, pages 59-68, Springer LNCS, 2021

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Amjad Khan, Manfredo Atzori, Vincent Andrearczyk and Henning Müller, Generalizing Convolution Neural Networks on Stain Color Heterogeneous Data for Computational Pathology, in: SPIE Medical Imaging, Houston, TX, USA,, 2020

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Oscar Perdomo, Vincent Andrearczyk, Fabrice Meriaudeau, Henning Müller and Fabio A. Gonzalez, Glaucoma Diagnosis from Eye Fundus Images Based on Deep Morphometric Feature Estimation, in: OMIA at MICCAI, Granada, Spain, 2018

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Mara Graziani, Sebastian Otalora, Henning Müller and Vincent Andrearczyk, Guiding CNNs towards Relevant Concepts by Multi-task and Adversarial Learning, arxiv, 2020

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Head and Neck Tumor Segmentation, Springer International Publishing, 2021

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Head and Neck Tumor Segmentation and Outcome Prediction, Springer International Publishing, 2022

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Vincent Andrearczyk, Valentin Oreiller, Mathieu Hatt and Adrien Depeursinge, Head and Neck Tumor Segmentation and Outcome Prediction, Springer International Publishing, 2023

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Vincent Andrearczyk, Valentin Oreiller, Mario Jreige, Sarah Boughdad, Catherine Cheze-Le-Rest, John O. Prior, Mathieu Hatt and Adrien Depeursinge, HEad and neCK TumOR segmentation and outcome prediction using AI: lessons from three consecutive years of the HECKTOR challenge, in: European Head and Neck Society (EHNS) on Artificial Intelligence (AI) in Head & Neck Oncology, Lausanne and virtual, 2023

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Vincent Andrearczyk, Valentin Oreiller, Mario Jreige, Hesham Elhalawani, Sarah Boughdad, Catherine Cheze-Le-Rest, John O. Prior, Mathieu Hatt and Adrien Depeursinge, HEad and neCK TumOR segmentation and outcome prediction: The HECKTOR challenge, in: European Society of Radiology, 2022

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Valentin Oreiller, Vincent Andrearczyk, Mario Jreige, Sarah Boughdad, Hesham Elhalawani, Joel Castelli, Martin Vallières, Simeng Zhu, Juanying Xie, Ying Peng, Andrei Iantsen, Mathieu Hatt, Yading Yuan, Jun Ma, Xiaoping Yang, Chinmay Rao, Suraj Pai, Kanchan Ghimire, Xue Feng, Mohamed A. Naser, Clifton D. Fuller, Fereshteh Yousefirizi, Arman Rahmim, Huai Chen, Lisheng Wang, John O. Prior and Adrien Depeursinge, Head and Neck Tumor Segmentation in PET/CT: The HECKTOR Challenge (2022), in: Medical Image Analysis, 77(102336)

[]: IF 2020 = 8.545

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Federico Spagnolo, Adrien Depeursinge, Vincent Andrearczyk, Pascal Benkert, Stefanie Müller, Lutz Achtnichts, Jochen Vehoff, Giulio Di Santo, Oliver Findling, Andrew Chan, Anke Salmen, Caroline Pot, Claire Bridel, Chiara Zecca, Tobias Johannes Derfuss, Johanna M. Lieb, Luca Remonda, Franca Wagner, Maria-Isabel Vargas Gomez, Renaud Du Pasquier, Patrice Lalive, Emanuele Pravatà, Johannes Weber, Claudio Gobbi, David Leppert, Nataliia Molchanova, Meritxell Bach Cuadra, Po-Jui Lu, Mario Ocampo-Pineda, Lester Melie-Garcia, Cagol Alessandro, Ludwig Kappos, Jens Kuhle and Cristina Granziera, Identification of paramagnetic rim lesions using conventional MRI - a deep learning approach, in: 39th Congress Of The European Committee For Treatment And Research In Multiple Sclerosis (ECTRIMS), 2023

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Sebastian Otalora, Manfredo Atzori, Vincent Andrearczyk and Henning Müller, Image Magnification Regression Using DenseNet for Exploiting Histopathology Open Access Content, in: MICCAI 2018 - Computational Pathology Workshop (COMPAY), Granada, Spain, 2018

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Bogdan Ionescu, Henning Müller, Alba García Seco de Herrera, Vincent Andrearczyk, Yashin Dicente Cid, Vitali Liauchuk, Vassili Kovalev, Sadid A. Hasan, Yuan Ling, Oladimeji Farri, Joey Liu, Matthew Lungren, Duc-Tien Dang-Nguyen, Luca Piras, Michael Riegler, Liting Zhou, Mathias Lux, Cathal Gurrin, Adrian Clarck, Jon Chamberlain, Konstantinos Karampidis, Nikos Vasillopoulos, Carlos Roberto del Blanco, Carlos Cuevas Rodriguez, Ergina Kavallieratou and Narciso Garcia, ImageCLEF 2019: Multimedia Retrieval in Medical Nature, Security and Lifelogging Applications, in: ECIR 2019, Cologne, Germany, 2019

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Mara Graziani, James M. Brown, Vincent Andrearczyk, Veysi Yildiz, J. Peter Campbelle, Deniz Erdogmus, Stratis Ioannidis, Michael F. Chiange, Jayashree Kalpathy-Cramer and Henning Müller, Improved interpretability for computer-aided severity assessment of retinopathy of prematurity, in: SPIE Medical Imaging, San Diego, CA, USA, 2019

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Federico Spagnolo, Nataliia Molchanova, Roger Schaer, Mario Ocampo-Pineda, Meritxell Bach Cuadra, Lester Melie-Garcia, Cristina Granziera, Vincent Andrearczyk and Adrien Depeursinge, Instance-level explanations in multiple sclerosis lesion segmentation: a novel localized saliency map, in: ISMRM 2024, 2024

Federico Spagnolo, Nataliia Molchanova, Roger Schaer, Meritxell Bach Cuadra, Mario Ocampo-Pineda, Lester Melie-Garcia, Cristina Granziera, Vincent Andrearczyk and Adrien Depeursinge, Instance-level quantitative saliency in multiple sclerosis lesion segmentation (2024), in: arxiv

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Mara Graziani, Thomas Lompech, Henning Müller, Adrien Depeursinge and Vincent Andrearczyk, Interpretable CNN Pruning for Preserving Scale-Covariant Features in Medical Imaging, in: Workshop on Interpretability of Machine Intelligence in Medical Image Computing at MICCAI 2020, 2020

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Mara Graziani, Henning Müller and Vincent Andrearczyk, Interpreting intentionally flawed models with linear probes, in: ICCV workshop on statistical deep learning in computer vision, Seoul, Korea, 2019

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