Roger Schaer - HES SO Valais Publications

Christoph Aberle, Michael Bach, Oscar Jimenez del Toro, Roger Schaer, Kyriakos Flouris, Ender Konukoglu, Henning Müller, Adrien Depeursinge and Markus Obmann, Influence of CT Scanners on Radiomics Features in Abdominal CT: A Multicenter Phantom Study, in: European Congress of Radiology, 2024

Daniel Abler, Roger Schaer, Valentin Oreiller, Himanshu Verma, Julien Reichenbach, Orfeas Aidonopoulos, Florian Evéquoz, Mario Jreige, John O. Prior and Adrien Depeursinge, QuantImage v2: A Comprehensive and Integrated Physician-Centered Cloud Platform for Radiomics and Machine Learning Research (2023), in: European Radiology Experimental, 7:16

[]: IF 2022: 3.75

Manfredo Atzori, Sebastian Otalora, Roger Schaer, Mats Andersson, Kristian Euren, Martin Hedlund, lena kajland Wilen and Henning Müller, A retrieval system for digital pathology for private datasets and scientific literature, in: European Congress of Digital Pathology, Helsinki, Finland, 2018

Manfredo Atzori, Roger Schaer, Matteo Cognolato and Henning Müller, Electromyography for Hand Prosthetics Demo, in: XXVIII Conférence francophone sur l'Interaction Homme-Machine, Fribourg, Suisse, 2016

Michael Bach, Christoph Aberle, Adrien Depeursinge, Oscar Jimenez del Toro, Roger Schaer, Kyriakos Flouris, Ender Konukoglu, Henning Müller and Markus Obmann, 3D-Printed Iodine-Ink CT Phantom for Radiomics Feature Extraction - Advantages and Challenges (2023), in: Medical Physics, 50:9(5682-5697)

[]: IF 2023: 4.506

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Sylvain Cardin, Mouna {Cerra Chekara}, Christophe Bolinhas, Maria Sisto, Roger Schaer, Mélanie Bieler, Daniel Perez-Marcos, Stéphane Gobron and Antoine Widmer, Gamification to improve adherence in home-based activities for seniors, 2019

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Joel Castelli, Adrien Depeursinge, Vanessa Ndoh, Anne Devillers, Yashin Dicente Cid, Roger Schaer, John O. Prior, J. Bourhis, C. Cire and R. De Crevoisier, Valeur de la TEP au 18-FDG pour prédire la récidive dans les cancers ORL non oropharyngé traités par radio-chimiothérapie, in: Société Française de radiothérapie Oncologique, 2017

Adrien Depeursinge, Vincent Andrearczyk, Philip Whybra, Joost van Griethuysen, Henning Müller, Roger Schaer, Martin Vallières and Alex Zwanenburg, Standardised convolutional filtering for radiomics, 2020

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Adrien Depeursinge, Yashin Dicente Cid, Roger Schaer, R. De Crevoisier, John O. Prior and Joel Castelli, Comparing 18-FDG PET 3D texture attributes for the prediction of survival and recurrence in oropharyngeal cancers treated with radiotherapy, in: Workshop on the Prediction and Modeling of response to Molecular and External Beam Radiotherapies, Le Bono, France, 2017

Adrien Depeursinge and Roger Schaer, Quality Assessment for Interoperable Quantitative CT imaging (QA4IQI) - Open access to standardized quantitative imaging, HES-SO Valais-Wallis, 2022

Anjani Dhrangadhariya, Roger Hilfiker, Roger Schaer and Henning Müller, Machine Learning Assisted Citation Screening for Systematic Reviews, in: Medical Informatics Europe 2020, Geneva, Switzerland, 2020

Yashin Dicente Cid, Joel Castelli, Roger Schaer, Nathaniel Scher, Anastasia Pomoni, John O. Prior and Adrien Depeursinge, QuantImage: An Online Tool for High-Throughput 3D Radiomics Feature Extraction in PET-CT, in: Biomedical Texture Analysis: Fundamentals, Applications and Tools, pages 349-377, Elsevier, 2017

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Yashin Dicente Cid, Roger Schaer and Adrien Depeursinge, QuantImage: An Online Tool for High-Throughput 3D Radiomics Feature Extraction in PET-CT, Demonstration at SPIE MI 2017, 2017

[]: https://radiomics.hevs.ch

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Fabien Dubosson, Roger Schaer, Roland Savioz and Michael Schumacher, Going beyond the relapse peak on social networks smoking cessation programs: ChatBot opportunities (2017), in: Swiss Medical Informatics

Grace Eden, Esther González-Martínez, Antoine Widmer, Roger Schaer, Henning Müller, Marcel Henry and Florian Evéquoz, Guider la conception itérative de prototypes au moyen du Modèle d’Evaluation de l’Activité, 28eme Conférence Francophone sur l'Interaction Homme-Machine, Fribourg, Switzerland, pages 314-320, ACM, 2016

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Ivan Eggel, Roger Schaer and Henning Müller, Distributed container-based evaluation platform for private/large datasets, in: ISPDC 2018, Geneva, Switzerland, 2018

Ivan Eggel, Roger Schaer and Henning Müller, VISCERAL book, chapter Using the Cloud as a Platform for Evaluation and Data Preparation, Springer, 2017

Ivan Eggel, Roger Schaer and Henning Müller, Using the Cloud as a Platform for Evaluation and Data Preparation, chapter Using the Cloud as a Platform for Evaluation and Data Preparation, Springer, 2016

Kyriakos Flouris, Oscar Jimenez del Toro, Christoph Aberle, Michael Bach, Roger Schaer, Markus Obmann, Bram Stieltjes, Henning Müller, Adrien Depeursinge and Ender Konukoglu, Assessing radiomics feature stability with simulated CT acquisitions (2022), in: Scientific Reports, 12:1(4732)

[]: IF 2020 = 4.379

Alba García Seco de Herrera, Antonio Foncubierta-Rodríguez, Dimitrios Markonis, Roger Schaer and Henning Müller, Crowdsourcing for Medical Image Classification, 2014

Alba García Seco de Herrera, Dimitrios Markonis, Ranveer Joyseeree, Roger Schaer, Antonio Foncubierta-Rodríguez and Henning Müller, Semi–Supervised Learning for Image Modality Classification, in: ECIR workshop MRMD, Vienna, Austria, 2015

Alba García Seco de Herrera, Dimitrios Markonis, Roger Schaer, Ivan Eggel and Henning Müller, The medGIFT Group in ImageCLEFmed 2013, in: CLEF working Notes 2013, Valencia, Spain, 2013

Alba García Seco de Herrera, Roger Schaer, Sameer Antani and Henning Müller, Using Crowdsourcing for Multi-label Biomedical Compound Figure Annotation, in: MICCAI workshop Labels, Springer, 2016

Alba García Seco de Herrera, Roger Schaer, Stefano Bromuri and Henning Müller, Overview of the ImageCLEF 2016 Medical Task, in: CLEF working notes 2016, CEUR, 2016

Alba García Seco de Herrera, Roger Schaer, Dimitrios Markonis and Henning Müller, Comparing Fusion Techniques for the ImageCLEF 2013 Medical Case Retrieval Task (2015), in: Computerized Medical Imaging and Graphics, 39(46–54)

[]: (IF = 1.664)

Alba García Seco de Herrera, Roger Schaer and Henning Müller, Shangri-La: a medical case-based retrieval tool (2017), in: Journal of the American Society for Information Science, 68:11(2587–2601)

Alba García Seco de Herrera, Roger Schaer and Henning Müller, Shangri-La: a medical case-based retrieval tool (2016), in: Journal of the American Society for Information Science

[]: IF 2013=2.230

Orcun Goksel, Antonio Foncubierta-Rodríguez, Oscar Jimenez del Toro, Henning Müller, Georg Langs, Marc André Weber, Bjoern Menze, Ivan Eggel, Katharina Gruenberg, Marianne Winterstein, Markus Holzer, Markus Krenn, Georgios Kontokotsios, Sokratis Met, Roger Schaer, Abdel Aziz Taha, András Jakab, Tomas Salas Fernandez and Allan Hanbury, Overview of the VISCERAL Challenge at ISBI 2015, in: VISCERAL Anatomy 3 proceedings, pages 6-11, 2015

Katharina Gruenberg, Marc André Weber, Oscar Jimenez del Toro, Orcun Goksel, Bjoern Menze, Henning Müller, Georg Langs, Ivan Eggel, Markus Holzer, Georgios Kontokotsios, Markus Krenn, Roger Schaer, Abdel Aziz Taha, Marianne Winterstein and Allan Hanbury, VISCERAL-VISual Concept Extraction challenge in RAdioLogy: Segmentation challenge: overview, insights and preliminary results, in: ECR, Vienna, Austria, 2015

Oscar Jimenez del Toro, Christoph Aberle, Michael Bach, Roger Schaer, Markus Obmann, Kyriakos Flouris, Ender Konukoglu, Bram Stieltjes, Adrien Depeursinge and Henning Müller, Revealing most suitable CT radiomics features for retrospective studies with heterogeneous datasets, in: European Congress of Radiology (ECR) 2021, ONLINE edition, 2021

Oscar Jimenez del Toro, Christoph Aberle, Michael Bach, Roger Schaer, Markus Obmann, Kyriakos Flouris, Ender Konukoglu, Bram Stieltjes, Henning Müller and Adrien Depeursinge, The discriminative power and stability of radiomics features with CT variations: Task-based analysis in an anthropomorphic 3D-printed CT phantom (2021), in: Investigative Radiology, 56:12(820-825)

[]: IF 2020 = 5.156

Oscar Jimenez del Toro, Christoph Aberle, Roger Schaer, Michael Bach, Kyriakos Flouris, Ender Konukoglu, Bram Stieltjes, Markus Obmann, André Anjos, Henning Müller and Adrien Depeursinge, Comparing Stability and Discriminatory Power of Handcrafted Versus Deep Radiomics: A 3D-Printed Anthropomorphic Phantom Study, in: 12th IEEE European Workshop on Visual Information Processing, pages 62-66, 2024

Oscar Jimenez del Toro, Michael Bach, Christoph Aberle, Roger Schaer, Markus Obmann, Kyriakos Flouris, Ender Konukoglu, Bram Stieltjes, Henning Müller and Adrien Depeursinge, Assessment of the stability and discriminative power of radiomics features in liver lesions using an anthropomorphic 3D-printed CT phantom, in: Scientific session SGR-SSR, 2021

Oscar Jimenez del Toro, Orcun Goksel, Bjoern Menze, Henning Müller, Georg Langs, Marc André Weber, Ivan Eggel, Katharina Gruenberg, Markus Holzer, András Jakab, Georgios Kontokotsios, Markus Krenn, Tomas Salas Fernandez, Roger Schaer, Abdel Aziz Taha, Marianne Winterstein and Allan Hanbury, VISCERAL - VISual Concept Extraction Challenge in RAdioLogy: ISBI 2014 Challenge Organization, in: Proceedings of the VISCERAL Challenge at ISBI, Beijing, China, pages 6-15, 2014

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Oscar Jimenez del Toro, Abdel Aziz Taha, Katharina Gruenberg, Markus Krenn, Marianne Winterstein, Henning Müller, Orcun Goksel, Bjoern Menze, Georg Langs, Marc André Weber, Tomas Salas Fernandez, Antonio Foncubierta-Rodríguez, Ivan Eggel, Roger Schaer, András Jakab, Georgios Kontokotsios, Mohammad A. Dabbah, Yashin Dicente Cid, Tobias Gass, Mattias Heinrich, Fucang Jia, Fredrik Kahl, Razmig Kechichian, Dominic Mai, Assaf B. Spanier, Graham Vincent, Chunliang Wang and Allan Hanbury, Cloud–based Evaluation of Organ Segmentation and Landmark Detection Algorithms: VISCERAL Anatomy Benchmarks (2016), in: IEEE Transactions on Medical Imaging

[]: IF 2016=3.76

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Ranveer Joyseeree, Roger Schaer and Henning Müller, A Demo of Multimodal Medical Retrieval, in: Workshop on Content-based Multimedia Indexing (CBMI), Bucharest, Romania, 2016

Dimitrios Markonis, René Donner, Markus Holzer, Thomas Schlegl, Roger Schaer, Georg Langs and Henning Müller, KHRESMOI for radiologists - Visual search in radiology archives and the open-access medical literature (2013), in: Health Management, 13:3(23--24)

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Dimitrios Markonis, Roger Schaer, Ivan Eggel, Henning Müller and Adrien Depeursinge, Using MapReduce for Large-scale Medical Image Analysis (2015), in: arXiv:1510.06937

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Dimitrios Markonis, Roger Schaer, Ivan Eggel, Henning Müller and Adrien Depeursinge, Using MapReduce for Large–scale Medical Image Analysis, in: 2nd IEEE Conference on Healthcare Informatics, Imaging and Systems Biology (HISB), La Jolla, California, 2012

Dimitrios Markonis, Roger Schaer, Alba García Seco de Herrera and Henning Müller, The Parallel Distributed Image Search Engine (ParaDISE) (2017), in: ArXiv(1701.05596)

Dimitrios Markonis, Roger Schaer and Henning Müller, Evaluating Multimodal Relevance Feedback Techniques for Medical Image Retrieval (2016), in: Journal of Information Retrieval

[]: IF = 0.917

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Dimitrios Markonis, Roger Schaer and Henning Müller, Multi-modal relevance feedback for medical image retrieval, in: SIGIR workshop on Medical Information Retrieval, Gold Coast, Australia, 2014

Jakub Mlynar, Adrien Depeursinge, John O. Prior, Roger Schaer, Alexandre Martroye de Joly and Florian Evéquoz, Making sense of radiomics: Insights on human-AI collaboration in medical interaction from an observational user study (2024), in: Frontiers in Communication, 8

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Jakub Mlynar, Roger Schaer, Adrien Depeursinge, Daniel Abler, Mario Jreige, John O. Prior and Florian Evéquoz, Design implications of repurposing a radiomics research platform for education: The case of QuantImage v2, 2024

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Henning Müller, Vincent Andrearczyk, Oscar Jimenez del Toro, Anjani Dhrangadhariya, Roger Schaer and Manfredo Atzori, Using Publicly Available Medical Images from the Open Access Literature and Social Networks for Model Training and Knowledge Extraction, in: Multimedia Modeling (MMM 2020), Seoul, Korea, 2020

Sebastian Otalora, Manfredo Atzori, Roger Schaer, Mats Andersson, Kristian Eurén, Martin Hedlund, Lena Kajland Wilén and Henning Müller, Identification and retrieval of prostate cancer cases using a content-based search tool (2019), in: Pathology Informatics

Sebastian Otalora, Roger Schaer, Manfredo Atzori, Oscar Jimenez del Toro and Henning Müller, Deep learning based retrieval system for gigapixel histopathology cases and open access literature (2018), in: BioArXiv

Roger Schaer, Michael Bach, Markus Obmann, Kyriakos Flouris, Ender Konukoglu, Bram Stieltjes, Henning Müller, Christoph Aberle, Oscar Jimenez del Toro and Adrien Depeursinge, Task-Based Anthropomorphic CT Phantom for Radiomics Stability and Discriminatory Power Analyses (CT-Phantom4Radiomics), [Data set], 2023

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Roger Schaer, Yashin Dicente Cid, Emel Alkim, Sheryl John, Daniel L. Rubin and Adrien Depeursinge, Web-Based Tools for Exploring the Potential of Quantitative Imaging Biomarkers in Radiology: Intensity and Texture Analysis on the ePAD Platform, in: Biomedical Texture Analysis: Fundamentals, Applications and Tools, pages 379-410, Elsevier, 2017

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Roger Schaer, Alba García Seco de Herrera and Henning Müller, Shangri-La: Une interface Web pour la recherche basée sur des cas médicaux, 2015